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missing data
•
reset
3
votes
5
replies
7.7k
views
Wgcna with missing values - error with calculation of bicor correlations in pickSoftThreshold and blockwiseModules
software error
rnaseq
wgcna
missing data
8.4 years ago • updated 8.0 years ago
dvillarlozano
▴ 10
0
votes
4
replies
2.8k
views
how to handle missing data for SampleTable in DESeq2
deseq2
sample_table
missing data
updated 5.3 years ago by
g.wang2
• 0 • written 9.1 years ago by
anpham
▴ 60
1
vote
3
replies
1.5k
views
Missing Clinical LIHC Data
Missing Data
TCGAbiolinks
Kaplan-Meier
LIHC
Xenabrowser
4.5 years ago
jam526
• 0
0
votes
1
reply
1.0k
views
Web CellHTS2 data upload
cellhts2
upload
missing data
updated 8.3 years ago by
Joseph Barry
▴ 160 • written 8.3 years ago by
zmorehouse
• 0
2
votes
5
replies
2.4k
views
Why does limma contrast.fit produces NA's for all contrast although missing data only in one condition?
limma
contrast
missing data
lmfit
makecontrasts
updated 6.7 years ago by
Gordon Smyth
50k • written 6.7 years ago by
wewolski
▴ 10
0
votes
13
replies
2.4k
views
handling missing data (NA) for methylaion analysis in Limma
limma
missing data
methylation
normalization
updated 6.5 years ago by
Aaron Lun
★ 28k • written 6.5 years ago by
mheydarpour
▴ 10
0
votes
1
reply
1.3k
views
DESeq2 paired design with missing samples and multiple conditions
deseq2
paired samples
missing data
multiple treatments
updated 5.4 years ago by
Michael Love
42k • written 5.4 years ago by
greg.deakin
• 0
1
vote
1
reply
1.0k
views
filter rows by missing values frequency
missing data
filter
updated 8.4 years ago by
James W. MacDonald
65k • written 8.4 years ago by
rgescudero
• 0
0
votes
0
replies
1.5k
views
Possible methodologies for missing value imputation of continuous variables in a data frame in R
missing data
missing value imputation
impute
MICE
bioconductor
8.6 years ago
svlachavas
▴ 830
0
votes
0
replies
824
views
imputing data using pcaMethods with large amounts of missing data in rows
pcamethods
missing data
7.1 years ago
eli-sava
• 0
0
votes
1
reply
1.5k
views
workflowInstall issues; missing Windows binary
software error
missing data
workflowinstall
9.0 years ago
anoll2
• 0
0
votes
0
replies
1.3k
views
baySeq missing data
bayseq
missing data
9.0 years ago
k.w.lau
• 0
12 results • Page
1 of 1
Recent ...
Replies
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
That ll be helpful. Thank you.
Comment: Log-cpm values from limma
by
Shaimaa Gamal
• 0
I have performed RUVg correction and extracted W, factors of unwanted variation. According to limma guide, > In the limma approach to RNA…
Comment: DSS CpG coverage threshold
by
j.gilbert
• 0
Might be a bit late for the original poster :') but in case anyone else is wondering, the DSS user guide says: *Q: Do I need to filter out…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
Segmentation is of the whole genome, I'll write some code for doing this later today.
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
I'll take a look later. For next time, I've edited your post by enclosing the code in triple backticks (on their own link). This properly …
Votes
A: Volcanoplot with limma - RAW P-values or Adj.P-Values
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: minfi latest update for EPIC V2 chip
A: Error in DESeqDataSet : some values in assay are not integers
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